Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
ESCA rs72635206 chr8:41377872 C/G 1.2E-7 182 12.97 20 2.7 KM Plot
ESCA rs72646703 chr8:41302647 C/T 1.2E-7 182 13.02 20 2.7 KM Plot
ESCA rs72646705 chr8:41303551 A/G 1.2E-7 182 13.02 20 2.7 KM Plot
ESCA rs72646716 chr8:41308295 G/A 1.63E-7 182 12.97 18.53 2.7 KM Plot
ESCA rs72646717 chr8:41308918 T/A 1.02E-7 182 12.93 19.27 2.7 KM Plot
ESCA rs72690128 chr8:120870562 G/C 4.17E-7 182 13 19.3 3.73 KM Plot
ESCA rs72690134 chr8:120875842 C/T 6.81E-6 184 12.87 18.57 3.6 KM Plot
ESCA rs72690137 chr8:120877448 G/A 6.81E-6 184 12.87 18.57 3.6 KM Plot
ESCA rs7270354 chr20:44607661 C/T 9.91E-5 184 13.1 16.13 1.87 KM Plot
ESCA rs72723359 chr1:102917016 G/A 8.43E-7 183 12.98 16.17 2.7 KM Plot
ESCA rs72723368 chr1:102928946 C/G 1.02E-6 180 12.98 13.73 2.7 KM Plot
ESCA rs7279372 chr21:45577101 T/C 3.7E-5 180 6.4 13.4 13.57 KM Plot
ESCA rs7280558 chr21:45577102 G/A 3.7E-5 180 6.4 13.4 13.57 KM Plot
ESCA rs72818549 chr16:88085718 T/C 8.5E-6 183 13.35 13.23 3.2 KM Plot
ESCA rs72835239 chr10:129359519 G/T 9.57E-5 181 13.38 9.23 3.73 KM Plot